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SRX3551120: 3376
1 ILLUMINA (Illumina HiSeq 2500) run: 25M spots, 4.5G bases, 2.2Gb downloads

Design: Stool samples were homogenized in 1 mL of RNAlater. The NucliSens Magnetic Extraction kit and the QIAamp Stool DNA Miniprep Kit were used to extract nucleic acids from samples total nucleic acids and DNA respectively. Total nucleic acids were initially treated with the TURBO DNA-free kit and purified using the RNeasy MinElute Cleanup kit. For removal of ribosomal RNA from plant bacteria and mammalian host prior to RNA library preparation the total purified RNA was subjected to the ScriptSeq Complete Gold Kit: Epidemiology. The MiniElute PCR Purification Kit and the Agencourt AMPure XP System: PCR Purification kit were used to purify the PCR-amplified products whenever requested by the ScriptSeq kit protocol. DNA libraries were constructed using the DNA directly in Nextera DNA Sample Preparation kit.
Submitted by: LVH
Study: Gorilla fecal virome
PRJNA419744 • SRP128846 • All experiments • All runs
show Abstracthide Abstract
The aim of this study was to identify and compare enteric viromes of SIV-infected and uninfected gorillas, and to assess their relationship with SIVgor pathogenesis in their natural host.
Sample: 3376
SAMN08143625 • SRS2824509 • All experiments • All runs
Organism: gut metagenome
Library:
Name: CP3376
Instrument: Illumina HiSeq 2500
Strategy: WGS
Source: METAGENOMIC
Selection: other
Layout: PAIRED
Runs: 1 run, 25M spots, 4.5G bases, 2.2Gb
Run# of Spots# of BasesSizePublished
SRR646088424,954,9694.5G2.2Gb2018-05-31

ID:
4931949

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